An R package has been created to help R users to access and visualise eReefs marine model outputs directly from NCI servers. The package contains a few useful functions to make accessing eReefs and other CSIRO-EMS output files easier, and is available through https://github.com/open-AIMS/ereefs, with documentation available at https://open-aims.github.io/ereefs/
Use Cases
- Extracting time-series of simulated water quality at your monitoring stations, to use together with observational data.
- Visualising a recent event in your area as an animated map.
- Extracting simulated data along a specified transect, such as a ship track.
- Extracting a vertical profile at a specified location and time.
- Extracting a vertical slice at a specified location and time.
Installation instructions
Copy and paste the following lines into R:
if (!requireNamespace("remotes")) {
install.packages("remotes")
}
remotes::install_github("open-aims/ereefs")
Featured Functions
Extract time-series from eReefs netcdf files
- get_ereefs_ts()
- get_ereefs_depth_integrated_ts ()
- get_ereefs_depth_specified_ts()
- get_ereefs_bottom_ts()